Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Gm27701-201ENSMUST00000184498 110 ntBASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Gm5035-201ENSMUST00000215581 927 ntBASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav8d-2Q5R1B6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav8d-2Q5R1B6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.33□□□□□ -0.11
Trav8d-2Q5R1B6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Gm8749-201ENSMUST00000117737 331 ntBASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Gm11425-201ENSMUST00000119608 498 ntBASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Gm5354-201ENSMUST00000182417 973 ntBASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Gm33320-201ENSMUST00000192232 530 ntBASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Gm9396-201ENSMUST00000076703 567 ntBASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-2Q5R1B6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Gm6916-202ENSMUST00000205523 195 ntBASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav8d-2Q5R1B6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-2Q5R1B6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms