Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm10290-201ENSMUST00000200451 999 ntBASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.1■□□□□ 0.33
Rc3h1Q4VGL6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Gm8749-201ENSMUST00000117737 331 ntBASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Rc3h1Q4VGL6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rc3h1Q4VGL6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.08■□□□□ 0.33
Rc3h1Q4VGL6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rc3h1Q4VGL6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 Mir7023-201ENSMUST00000185093 64 ntBASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 Gm28630-201ENSMUST00000187806 498 ntBASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h1Q4VGL6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h1Q4VGL6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms