Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Gm43347-201ENSMUST00000200226 580 ntBASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shisa3Q3UPR0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Gm25745-201ENSMUST00000174945 133 ntBASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Gm27459-201ENSMUST00000184860 107 ntBASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.8□□□□□ -0.36
Shisa3Q3UPR0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Gm28196-201ENSMUST00000187719 640 ntBASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shisa3Q3UPR0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.78□□□□□ -0.36
Shisa3Q3UPR0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms