Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Gm38027-201ENSMUST00000192315 235 ntBASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Gm7791-201ENSMUST00000219066 539 ntBASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Matn2-206ENSMUST00000228570 2798 ntBASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks1brtQ3UNC9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks1brtQ3UNC9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.66□□□□□ -0.7
Cks1brtQ3UNC9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms