Protein–RNA interactions for Protein: Q00915

Rbp1, Retinol-binding protein 1, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbp1Q00915 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Rbp1Q00915 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
Rbp1Q00915 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.64□□□□□ -0.07
Rbp1Q00915 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rbp1Q00915 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rbp1Q00915 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rbp1Q00915 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rbp1Q00915 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Rbp1Q00915 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rbp1Q00915 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rbp1Q00915 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rbp1Q00915 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rbp1Q00915 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rbp1Q00915 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Rbp1Q00915 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Rbp1Q00915 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rbp1Q00915 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rbp1Q00915 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rbp1Q00915 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.63□□□□□ -0.07
Rbp1Q00915 Gm7230-201ENSMUST00000173026 815 ntBASIC14.63□□□□□ -0.07
Rbp1Q00915 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.63□□□□□ -0.07
Rbp1Q00915 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.63□□□□□ -0.07
Rbp1Q00915 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.63□□□□□ -0.07
Rbp1Q00915 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rbp1Q00915 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
Rbp1Q00915 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.63□□□□□ -0.07
Rbp1Q00915 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rbp1Q00915 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rbp1Q00915 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rbp1Q00915 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rbp1Q00915 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.62□□□□□ -0.07
Rbp1Q00915 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.62□□□□□ -0.07
Rbp1Q00915 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Gm21362-201ENSMUST00000194272 928 ntBASIC14.62□□□□□ -0.07
Rbp1Q00915 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.62□□□□□ -0.07
Rbp1Q00915 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Rbp1Q00915 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.62□□□□□ -0.07
Rbp1Q00915 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Rbp1Q00915 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.62□□□□□ -0.07
Rbp1Q00915 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Rbp1Q00915 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rbp1Q00915 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.61□□□□□ -0.07
Rbp1Q00915 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.61□□□□□ -0.07
Rbp1Q00915 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbp1Q00915 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbp1Q00915 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Rbp1Q00915 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbp1Q00915 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbp1Q00915 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.61□□□□□ -0.07
Rbp1Q00915 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbp1Q00915 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rbp1Q00915 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rbp1Q00915 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbp1Q00915 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbp1Q00915 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rbp1Q00915 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rbp1Q00915 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rbp1Q00915 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms