Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cacna1aP97445 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cacna1aP97445 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.66□□□□□ -0.22
Cacna1aP97445 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.65□□□□□ -0.22
Cacna1aP97445 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cacna1aP97445 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.65□□□□□ -0.22
Cacna1aP97445 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cacna1aP97445 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Gm24543-201ENSMUST00000103867 82 ntBASIC13.65□□□□□ -0.22
Cacna1aP97445 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Cacna1aP97445 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.65□□□□□ -0.22
Cacna1aP97445 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.65□□□□□ -0.22
Cacna1aP97445 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1aP97445 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cacna1aP97445 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cacna1aP97445 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.64□□□□□ -0.23
Cacna1aP97445 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cacna1aP97445 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Cacna1aP97445 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm3436-201ENSMUST00000179930 840 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm29310-201ENSMUST00000185468 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21825-201ENSMUST00000185728 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm29109-201ENSMUST00000185895 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21896-201ENSMUST00000186520 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21873-201ENSMUST00000186728 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21794-201ENSMUST00000187056 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21880-201ENSMUST00000187275 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21826-201ENSMUST00000187451 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21198-201ENSMUST00000188393 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21749-201ENSMUST00000189343 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21901-201ENSMUST00000189568 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm29424-201ENSMUST00000189716 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm28599-201ENSMUST00000189838 694 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21867-201ENSMUST00000189917 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm29269-201ENSMUST00000190087 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21722-201ENSMUST00000190153 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm28423-201ENSMUST00000190701 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21899-201ENSMUST00000190745 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21910-201ENSMUST00000191163 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21849-201ENSMUST00000191571 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm28678-201ENSMUST00000191593 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm20910-201ENSMUST00000193268 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm21871-201ENSMUST00000194621 696 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.64□□□□□ -0.23
Cacna1aP97445 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.64□□□□□ -0.23
Cacna1aP97445 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.64□□□□□ -0.23
Cacna1aP97445 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms