Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.62□□□□□ -0.71
Cks1bP61025 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.62□□□□□ -0.71
Cks1bP61025 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Cks1bP61025 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC10.62□□□□□ -0.71
Cks1bP61025 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cks1bP61025 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.62□□□□□ -0.71
Cks1bP61025 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.62□□□□□ -0.71
Cks1bP61025 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Cks1bP61025 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cks1bP61025 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Cks1bP61025 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cks1bP61025 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cks1bP61025 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Gm26039-201ENSMUST00000158152 144 ntBASIC10.61□□□□□ -0.71
Cks1bP61025 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC10.61□□□□□ -0.71
Cks1bP61025 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC10.61□□□□□ -0.71
Cks1bP61025 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.61□□□□□ -0.71
Cks1bP61025 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC10.61□□□□□ -0.71
Cks1bP61025 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Cks1bP61025 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.61□□□□□ -0.71
Cks1bP61025 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1bP61025 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cks1bP61025 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Cks1bP61025 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Cks1bP61025 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.6□□□□□ -0.71
Cks1bP61025 Acot6-202ENSMUST00000222921 3622 ntBASIC10.6□□□□□ -0.71
Cks1bP61025 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cks1bP61025 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 AC166491.1-201ENSMUST00000227053 2308 ntBASIC10.6□□□□□ -0.71
Cks1bP61025 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.6□□□□□ -0.71
Cks1bP61025 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Cks1bP61025 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC10.6□□□□□ -0.71
Cks1bP61025 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms