Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 AA414768-201ENSMUST00000121924 1257 ntBASIC13.92□□□□□ -0.18
Sox2P48432 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox2P48432 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sox2P48432 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sox2P48432 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.92□□□□□ -0.18
Sox2P48432 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sox2P48432 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Sox2P48432 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox2P48432 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sox2P48432 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sox2P48432 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sox2P48432 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox2P48432 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox2P48432 Gm10499-201ENSMUST00000174094 934 ntBASIC13.91□□□□□ -0.18
Sox2P48432 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.91□□□□□ -0.18
Sox2P48432 Gm8655-201ENSMUST00000221159 852 ntBASIC13.91□□□□□ -0.18
Sox2P48432 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.91□□□□□ -0.18
Sox2P48432 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.91□□□□□ -0.18
Sox2P48432 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.91□□□□□ -0.18
Sox2P48432 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox2P48432 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Sox2P48432 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Sox2P48432 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Sox2P48432 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Sox2P48432 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sox2P48432 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox2P48432 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Sox2P48432 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.9□□□□□ -0.18
Sox2P48432 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox2P48432 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sox2P48432 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms