Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm45167-201ENSMUST00000208007 322 ntBASIC16.64■□□□□ 0.25
Sdc2P43407 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Sdc2P43407 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sdc2P43407 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.64■□□□□ 0.25
Sdc2P43407 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sdc2P43407 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.63■□□□□ 0.25
Sdc2P43407 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc2P43407 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sdc2P43407 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.62■□□□□ 0.25
Sdc2P43407 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.62■□□□□ 0.25
Sdc2P43407 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.62■□□□□ 0.25
Sdc2P43407 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.62■□□□□ 0.25
Sdc2P43407 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Sdc2P43407 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Sdc2P43407 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Sdc2P43407 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdc2P43407 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Gm7862-201ENSMUST00000121461 292 ntBASIC16.61■□□□□ 0.25
Sdc2P43407 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sdc2P43407 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.61■□□□□ 0.25
Sdc2P43407 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.61■□□□□ 0.25
Sdc2P43407 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Sdc2P43407 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sdc2P43407 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdc2P43407 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc2P43407 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc2P43407 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sdc2P43407 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sdc2P43407 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sdc2P43407 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc2P43407 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc2P43407 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc2P43407 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc2P43407 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc2P43407 Gm12008-201ENSMUST00000117791 755 ntBASIC16.6■□□□□ 0.25
Sdc2P43407 Gm11452-201ENSMUST00000122376 690 ntBASIC16.6■□□□□ 0.25
Sdc2P43407 Gm23547-201ENSMUST00000158210 271 ntBASIC16.6■□□□□ 0.25
Sdc2P43407 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sdc2P43407 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.6■□□□□ 0.25
Sdc2P43407 Gm18246-201ENSMUST00000221023 728 ntBASIC16.6■□□□□ 0.25
Sdc2P43407 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.6■□□□□ 0.25
Sdc2P43407 Gm10819-201ENSMUST00000099988 561 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms