Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pde6aP27664 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.18■□□□□ 0.34
Pde6aP27664 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pde6aP27664 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Pde6aP27664 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pde6aP27664 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pde6aP27664 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.18■□□□□ 0.34
Pde6aP27664 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Pde6aP27664 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6aP27664 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pde6aP27664 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6aP27664 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6aP27664 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6aP27664 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.17■□□□□ 0.34
Pde6aP27664 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Pde6aP27664 Gm9726-201ENSMUST00000180321 678 ntBASIC17.17■□□□□ 0.34
Pde6aP27664 Gm27920-201ENSMUST00000183953 96 ntBASIC17.17■□□□□ 0.34
Pde6aP27664 Gm2756-201ENSMUST00000195851 400 ntBASIC17.17■□□□□ 0.34
Pde6aP27664 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.17■□□□□ 0.34
Pde6aP27664 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.17■□□□□ 0.34
Pde6aP27664 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6aP27664 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6aP27664 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Pde6aP27664 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6aP27664 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pde6aP27664 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6aP27664 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6aP27664 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Pde6aP27664 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6aP27664 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.16■□□□□ 0.34
Pde6aP27664 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Pde6aP27664 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pde6aP27664 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Pde6aP27664 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pde6aP27664 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pde6aP27664 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pde6aP27664 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pde6aP27664 Mir1895-201ENSMUST00000122615 79 ntBASIC17.16■□□□□ 0.34
Pde6aP27664 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.16■□□□□ 0.34
Pde6aP27664 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.16■□□□□ 0.34
Pde6aP27664 Gm18057-201ENSMUST00000208220 503 ntBASIC17.16■□□□□ 0.34
Pde6aP27664 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.16■□□□□ 0.34
Pde6aP27664 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.16■□□□□ 0.34
Pde6aP27664 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pde6aP27664 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pde6aP27664 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6aP27664 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pde6aP27664 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pde6aP27664 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pde6aP27664 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pde6aP27664 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.15■□□□□ 0.34
Pde6aP27664 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
Pde6aP27664 Olfr286-202ENSMUST00000205305 969 ntBASIC17.15■□□□□ 0.34
Pde6aP27664 Chchd1-203ENSMUST00000224633 557 ntBASIC17.15■□□□□ 0.34
Pde6aP27664 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
Pde6aP27664 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6aP27664 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms