Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.85□□□□□ -0.67
TcraP01849 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
TcraP01849 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.85□□□□□ -0.67
TcraP01849 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
TcraP01849 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.85□□□□□ -0.67
TcraP01849 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
TcraP01849 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
TcraP01849 Gm10252-201ENSMUST00000209541 832 ntBASIC10.85□□□□□ -0.67
TcraP01849 Gm21559-201ENSMUST00000220638 855 ntBASIC10.85□□□□□ -0.67
TcraP01849 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Gm8587-201ENSMUST00000076538 843 ntBASIC10.85□□□□□ -0.67
TcraP01849 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
TcraP01849 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.85□□□□□ -0.67
TcraP01849 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Gm9889-202ENSMUST00000206983 1577 ntBASIC10.85□□□□□ -0.67
TcraP01849 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TcraP01849 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
TcraP01849 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TcraP01849 Gm11355-201ENSMUST00000121120 306 ntBASIC10.84□□□□□ -0.67
TcraP01849 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.84□□□□□ -0.67
TcraP01849 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
TcraP01849 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
TcraP01849 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
TcraP01849 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.84□□□□□ -0.67
TcraP01849 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.84□□□□□ -0.67
TcraP01849 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TcraP01849 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.84□□□□□ -0.67
TcraP01849 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TcraP01849 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.84□□□□□ -0.67
TcraP01849 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
TcraP01849 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TcraP01849 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TcraP01849 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TcraP01849 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
TcraP01849 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TcraP01849 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.83□□□□□ -0.68
TcraP01849 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TcraP01849 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TcraP01849 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
TcraP01849 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TcraP01849 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TcraP01849 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TcraP01849 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TcraP01849 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
TcraP01849 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TcraP01849 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.83□□□□□ -0.68
TcraP01849 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms