Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pdlim1O70400 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.63□□□□□ -0.07
Pdlim1O70400 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Pdlim1O70400 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.62□□□□□ -0.07
Pdlim1O70400 Gm11543-201ENSMUST00000120758 370 ntBASIC14.62□□□□□ -0.07
Pdlim1O70400 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.62□□□□□ -0.07
Pdlim1O70400 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.62□□□□□ -0.07
Pdlim1O70400 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pdlim1O70400 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pdlim1O70400 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.61□□□□□ -0.07
Pdlim1O70400 Gm6973-201ENSMUST00000117080 721 ntBASIC14.61□□□□□ -0.07
Pdlim1O70400 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.61□□□□□ -0.07
Pdlim1O70400 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.61□□□□□ -0.07
Pdlim1O70400 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Rprl2-201ENSMUST00000157150 290 ntBASIC14.61□□□□□ -0.07
Pdlim1O70400 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.61□□□□□ -0.07
Pdlim1O70400 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Pdlim1O70400 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Pdlim1O70400 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Gm18057-201ENSMUST00000208220 503 ntBASIC14.61□□□□□ -0.07
Pdlim1O70400 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pdlim1O70400 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pdlim1O70400 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pdlim1O70400 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.6□□□□□ -0.07
Pdlim1O70400 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Gm9726-201ENSMUST00000180321 678 ntBASIC14.6□□□□□ -0.07
Pdlim1O70400 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.6□□□□□ -0.07
Pdlim1O70400 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.6□□□□□ -0.07
Pdlim1O70400 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.6□□□□□ -0.07
Pdlim1O70400 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pdlim1O70400 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pdlim1O70400 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
Pdlim1O70400 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms