Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Banf1O54962 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.1■□□□□ 0.01
Banf1O54962 Gm12008-201ENSMUST00000117791 755 ntBASIC15.1■□□□□ 0.01
Banf1O54962 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Banf1O54962 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Banf1O54962 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Banf1O54962 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Banf1O54962 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Banf1O54962 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Banf1O54962 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.09■□□□□ 0.01
Banf1O54962 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.09■□□□□ 0.01
Banf1O54962 Gm7977-201ENSMUST00000193787 748 ntBASIC15.09■□□□□ 0.01
Banf1O54962 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.09■□□□□ 0.01
Banf1O54962 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Banf1O54962 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Banf1O54962 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Banf1O54962 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.09■□□□□ 0.01
Banf1O54962 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Banf1O54962 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.08■□□□□ 0.01
Banf1O54962 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Banf1O54962 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Banf1O54962 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Banf1O54962 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.08■□□□□ 0.01
Banf1O54962 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.08■□□□□ 0
Banf1O54962 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Banf1O54962 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.08■□□□□ 0
Banf1O54962 Gm15173-201ENSMUST00000122049 433 ntBASIC15.08■□□□□ 0
Banf1O54962 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Banf1O54962 Gm27459-201ENSMUST00000184860 107 ntBASIC15.08■□□□□ 0
Banf1O54962 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.08■□□□□ 0
Banf1O54962 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Banf1O54962 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.08■□□□□ 0
Banf1O54962 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.08■□□□□ 0
Banf1O54962 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Banf1O54962 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.07■□□□□ 0
Banf1O54962 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Banf1O54962 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Banf1O54962 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Banf1O54962 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Banf1O54962 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Banf1O54962 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.07■□□□□ 0
Banf1O54962 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Banf1O54962 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Banf1O54962 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Banf1O54962 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.07■□□□□ 0
Banf1O54962 Birc2-201ENSMUST00000054878 378 ntBASIC15.07■□□□□ 0
Banf1O54962 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms