Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Stx1aO35526 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Stx1aO35526 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Stx1aO35526 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Stx1aO35526 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Stx1aO35526 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Stx1aO35526 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Stx1aO35526 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.68■□□□□ 0.26
Stx1aO35526 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Stx1aO35526 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.68■□□□□ 0.26
Stx1aO35526 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Stx1aO35526 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Stx1aO35526 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Stx1aO35526 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Stx1aO35526 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Stx1aO35526 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.67■□□□□ 0.26
Stx1aO35526 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Gm12644-201ENSMUST00000119935 606 ntBASIC16.67■□□□□ 0.26
Stx1aO35526 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
Stx1aO35526 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Stx1aO35526 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.67■□□□□ 0.26
Stx1aO35526 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.67■□□□□ 0.26
Stx1aO35526 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Stx1aO35526 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Stx1aO35526 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.66■□□□□ 0.26
Stx1aO35526 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.66■□□□□ 0.26
Stx1aO35526 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.66■□□□□ 0.26
Stx1aO35526 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.66■□□□□ 0.26
Stx1aO35526 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Stx1aO35526 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Stx1aO35526 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stx1aO35526 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Stx1aO35526 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Stx1aO35526 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Stx1aO35526 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.65■□□□□ 0.26
Stx1aO35526 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.65■□□□□ 0.26
Stx1aO35526 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Stx1aO35526 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Stx1aO35526 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.65■□□□□ 0.26
Stx1aO35526 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stx1aO35526 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Stx1aO35526 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.64■□□□□ 0.26
Stx1aO35526 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Stx1aO35526 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.64■□□□□ 0.26
Stx1aO35526 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Stx1aO35526 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Stx1aO35526 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms