Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ube3aO08759 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.04■□□□□ 0.16
Ube3aO08759 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ube3aO08759 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ube3aO08759 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.04■□□□□ 0.16
Ube3aO08759 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ube3aO08759 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.04■□□□□ 0.16
Ube3aO08759 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Ube3aO08759 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
Ube3aO08759 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.04■□□□□ 0.16
Ube3aO08759 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube3aO08759 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.03■□□□□ 0.16
Ube3aO08759 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.03■□□□□ 0.16
Ube3aO08759 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.03■□□□□ 0.16
Ube3aO08759 Gm10499-201ENSMUST00000174094 934 ntBASIC16.03■□□□□ 0.16
Ube3aO08759 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Ube3aO08759 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.03■□□□□ 0.16
Ube3aO08759 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube3aO08759 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ube3aO08759 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.02■□□□□ 0.16
Ube3aO08759 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ube3aO08759 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3aO08759 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3aO08759 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3aO08759 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3aO08759 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3aO08759 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.02■□□□□ 0.16
Ube3aO08759 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.02■□□□□ 0.16
Ube3aO08759 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3aO08759 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3aO08759 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Ube3aO08759 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ube3aO08759 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Ube3aO08759 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube3aO08759 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube3aO08759 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.02■□□□□ 0.15
Ube3aO08759 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ube3aO08759 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
Ube3aO08759 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Ube3aO08759 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ube3aO08759 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Gm8097-201ENSMUST00000117903 829 ntBASIC16.01■□□□□ 0.15
Ube3aO08759 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Ube3aO08759 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.01■□□□□ 0.15
Ube3aO08759 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.01■□□□□ 0.15
Ube3aO08759 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ube3aO08759 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ube3aO08759 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.01■□□□□ 0.15
Ube3aO08759 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ube3aO08759 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ube3aO08759 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ube3aO08759 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ube3aO08759 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ube3aO08759 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ube3aO08759 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms