Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Gm24196-201ENSMUST00000179161 110 ntBASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Gm43118-201ENSMUST00000199149 775 ntBASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc188F6WEU2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Gm2383-201ENSMUST00000181461 807 ntBASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc188F6WEU2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Gm37259-201ENSMUST00000193903 849 ntBASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc188F6WEU2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Gm24514-201ENSMUST00000174961 285 ntBASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Rps4l-202ENSMUST00000204242 789 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms