Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.24■□□□□ 0.03
Atf6F6VAN0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf6F6VAN0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf6F6VAN0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Atf6F6VAN0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf6F6VAN0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf6F6VAN0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf6F6VAN0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Gm12008-201ENSMUST00000117791 755 ntBASIC15.23■□□□□ 0.03
Atf6F6VAN0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.23■□□□□ 0.03
Atf6F6VAN0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atf6F6VAN0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.22■□□□□ 0.03
Atf6F6VAN0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.22■□□□□ 0.03
Atf6F6VAN0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Atf6F6VAN0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Atf6F6VAN0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Atf6F6VAN0 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.21■□□□□ 0.02
Atf6F6VAN0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atf6F6VAN0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atf6F6VAN0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atf6F6VAN0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atf6F6VAN0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Atf6F6VAN0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Atf6F6VAN0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atf6F6VAN0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atf6F6VAN0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.2■□□□□ 0.02
Atf6F6VAN0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Atf6F6VAN0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atf6F6VAN0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms