Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12887B1AVM1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12□□□□□ -0.49
Gm12887B1AVM1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12□□□□□ -0.49
Gm12887B1AVM1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12□□□□□ -0.49
Gm12887B1AVM1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12□□□□□ -0.49
Gm12887B1AVM1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12□□□□□ -0.49
Gm12887B1AVM1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Gm12887B1AVM1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12□□□□□ -0.49
Gm12887B1AVM1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12□□□□□ -0.49
Gm12887B1AVM1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12□□□□□ -0.49
Gm12887B1AVM1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12□□□□□ -0.49
Gm12887B1AVM1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12□□□□□ -0.49
Gm12887B1AVM1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12887B1AVM1 Gm45293-201ENSMUST00000209754 1812 ntBASIC12□□□□□ -0.49
Gm12887B1AVM1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm12887B1AVM1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Gm12887B1AVM1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms