Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm33142-201ENSMUST00000193913 867 ntBASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-1A0A0G2JEV5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-1A0A0G2JEV5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-1A0A0G2JEV5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms