Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm9013-201ENSMUST00000132939 882 ntBASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm43799-201ENSMUST00000201845 579 ntBASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm23547-201ENSMUST00000158210 271 ntBASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm9987-201ENSMUST00000069768 567 ntBASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms