Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm13884-201ENSMUST00000118103 829 ntBASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm10060-201ENSMUST00000212002 111 ntBASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm7787-201ENSMUST00000216858 688 ntBASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ighv1-47A0A0A6YY41 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm9682-201ENSMUST00000197505 556 ntBASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm18195-201ENSMUST00000207604 706 ntBASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ighv1-47A0A0A6YY41 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm5682-201ENSMUST00000173402 505 ntBASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm10499-201ENSMUST00000174094 934 ntBASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ighv1-47A0A0A6YY41 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms