Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Efs-202ENSMUST00000227037 2540 ntBASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Phf1Q9Z1B8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Phf1Q9Z1B8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Gm14701-201ENSMUST00000117156 348 ntBASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Gm10499-201ENSMUST00000174094 934 ntBASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms