Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClcnkaQ9WUB7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Gm27300-201ENSMUST00000184085 97 ntBASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Gm27335-201ENSMUST00000184758 97 ntBASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ClcnkaQ9WUB7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.67□□□□□ -0.22
ClcnkaQ9WUB7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms