Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Grk6-207ENSMUST00000225925 2769 ntBASIC12.6□□□□□ -0.39
Six6Q9QZ28 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Six6Q9QZ28 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.6□□□□□ -0.39
Six6Q9QZ28 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.6□□□□□ -0.39
Six6Q9QZ28 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Six6Q9QZ28 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.59□□□□□ -0.39
Six6Q9QZ28 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.59□□□□□ -0.39
Six6Q9QZ28 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six6Q9QZ28 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Six6Q9QZ28 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Six6Q9QZ28 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six6Q9QZ28 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.58□□□□□ -0.4
Six6Q9QZ28 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.58□□□□□ -0.4
Six6Q9QZ28 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.58□□□□□ -0.4
Six6Q9QZ28 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.58□□□□□ -0.4
Six6Q9QZ28 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.58□□□□□ -0.4
Six6Q9QZ28 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.58□□□□□ -0.4
Six6Q9QZ28 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Six6Q9QZ28 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms