Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm4Q9QXA5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm4Q9QXA5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm4Q9QXA5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Lsm4Q9QXA5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Lsm4Q9QXA5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm4Q9QXA5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm4Q9QXA5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lsm4Q9QXA5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm4Q9QXA5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Gm8097-201ENSMUST00000117903 829 ntBASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lsm4Q9QXA5 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 AA414768-201ENSMUST00000121924 1257 ntBASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Lsm4Q9QXA5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm4Q9QXA5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm4Q9QXA5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm4Q9QXA5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.71□□□□□ -0.53
Lsm4Q9QXA5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm4Q9QXA5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Lsm4Q9QXA5 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm4Q9QXA5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lsm4Q9QXA5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Lsm4Q9QXA5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm4Q9QXA5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lsm4Q9QXA5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lsm4Q9QXA5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms