Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.79■□□□□ 0.28
Chd1lQ9CXF7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1lQ9CXF7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chd1lQ9CXF7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.79■□□□□ 0.28
Chd1lQ9CXF7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1lQ9CXF7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1lQ9CXF7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Chd1lQ9CXF7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1lQ9CXF7 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.79■□□□□ 0.28
Chd1lQ9CXF7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1lQ9CXF7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1lQ9CXF7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.79■□□□□ 0.28
Chd1lQ9CXF7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.79■□□□□ 0.28
Chd1lQ9CXF7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Acot6-202ENSMUST00000222921 3622 ntBASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Chd1lQ9CXF7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Mir3081-201ENSMUST00000175305 84 ntBASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1lQ9CXF7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1lQ9CXF7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Chd1lQ9CXF7 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1lQ9CXF7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1lQ9CXF7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1lQ9CXF7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.77■□□□□ 0.27
Chd1lQ9CXF7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1lQ9CXF7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1lQ9CXF7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1lQ9CXF7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1lQ9CXF7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Gm6433-201ENSMUST00000118634 875 ntBASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Chd1lQ9CXF7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd1lQ9CXF7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms