Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sft2d3Q9CSV6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sft2d3Q9CSV6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sft2d3Q9CSV6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sft2d3Q9CSV6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sft2d3Q9CSV6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sft2d3Q9CSV6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sft2d3Q9CSV6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sft2d3Q9CSV6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sft2d3Q9CSV6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sft2d3Q9CSV6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sft2d3Q9CSV6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sft2d3Q9CSV6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sft2d3Q9CSV6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Gm24513-201ENSMUST00000174964 138 ntBASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Gm27300-201ENSMUST00000184085 97 ntBASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Gm27335-201ENSMUST00000184758 97 ntBASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.69□□□□□ -0.38
Sft2d3Q9CSV6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Grk6-207ENSMUST00000225925 2769 ntBASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sft2d3Q9CSV6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.67□□□□□ -0.38
Sft2d3Q9CSV6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms