Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Gm9385-201ENSMUST00000117563 472 ntBASIC8□□□□□ -1.13
Sec61bQ9CQS8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC8□□□□□ -1.13
Sec61bQ9CQS8 Gm14126-201ENSMUST00000122345 395 ntBASIC8□□□□□ -1.13
Sec61bQ9CQS8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC8□□□□□ -1.13
Sec61bQ9CQS8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC8□□□□□ -1.13
Sec61bQ9CQS8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Sec61bQ9CQS8 CT030684.1-201ENSMUST00000227292 914 ntBASIC8□□□□□ -1.13
Sec61bQ9CQS8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC8□□□□□ -1.13
Sec61bQ9CQS8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC8□□□□□ -1.13
Sec61bQ9CQS8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Sec61bQ9CQS8 Gm13517-201ENSMUST00000120782 1495 ntBASIC8□□□□□ -1.13
Sec61bQ9CQS8 Gm4780-202ENSMUST00000215200 2644 ntBASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Gm6973-201ENSMUST00000117080 721 ntBASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Gm8410-201ENSMUST00000117225 605 ntBASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Gm16107-201ENSMUST00000162523 862 ntBASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Gm16026-204ENSMUST00000162652 683 ntBASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Gm38359-201ENSMUST00000191884 2225 ntBASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Sec61bQ9CQS8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Sec61bQ9CQS8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC7.98□□□□□ -1.13
Sec61bQ9CQS8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms