Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf111Q99ML9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Gm7230-201ENSMUST00000173026 815 ntBASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Rnf111Q99ML9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Gm7222-201ENSMUST00000117512 906 ntBASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Gm12008-201ENSMUST00000117791 755 ntBASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf111Q99ML9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf111Q99ML9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf111Q99ML9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf111Q99ML9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf111Q99ML9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf111Q99ML9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf111Q99ML9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms