Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb22Q91XZ8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Gm6973-201ENSMUST00000117080 721 ntBASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Gm2451-201ENSMUST00000199447 999 ntBASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Gm10290-201ENSMUST00000200451 999 ntBASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb22Q91XZ8 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Gm15483-201ENSMUST00000120338 456 ntBASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb22Q91XZ8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Gm2213-201ENSMUST00000197485 688 ntBASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb22Q91XZ8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb22Q91XZ8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb22Q91XZ8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pcdhb22Q91XZ8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb22Q91XZ8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb22Q91XZ8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb22Q91XZ8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb22Q91XZ8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb22Q91XZ8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb22Q91XZ8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms