Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Gm27437-201ENSMUST00000183429 107 ntBASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.94■□□□□ 0.3
Pcdhgc5Q91XW9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhgc5Q91XW9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhgc5Q91XW9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Gm2423-201ENSMUST00000074863 733 ntBASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.91■□□□□ 0.3
Pcdhgc5Q91XW9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms