Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Gm13365-201ENSMUST00000121188 973 ntBASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx41Q91VN6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx41Q91VN6 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Sybu-209ENSMUST00000228639 4113 ntBASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Gm9385-201ENSMUST00000117563 472 ntBASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Gm16198-201ENSMUST00000118766 670 ntBASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx41Q91VN6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx41Q91VN6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx41Q91VN6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.02■□□□□ 0.31
Ddx41Q91VN6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx41Q91VN6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx41Q91VN6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx41Q91VN6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.02■□□□□ 0.31
Ddx41Q91VN6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms