Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ndc1Q8VCB1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc1Q8VCB1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc1Q8VCB1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc1Q8VCB1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc1Q8VCB1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc1Q8VCB1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc1Q8VCB1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ndc1Q8VCB1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc1Q8VCB1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc1Q8VCB1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Gm10576-201ENSMUST00000191927 825 ntBASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc1Q8VCB1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Gm18889-201ENSMUST00000174284 929 ntBASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Mir6990-201ENSMUST00000183724 91 ntBASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Gm5312-201ENSMUST00000203728 547 ntBASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.01□□□□□ -0.17
Ndc1Q8VCB1 BC037039-201ENSMUST00000192003 2205 ntBASIC14□□□□□ -0.17
Ndc1Q8VCB1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Gm15920-201ENSMUST00000118998 402 ntBASIC14□□□□□ -0.17
Ndc1Q8VCB1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Gm37171-201ENSMUST00000192636 1185 ntBASIC14□□□□□ -0.17
Ndc1Q8VCB1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Gm14026-201ENSMUST00000120625 1789 ntBASIC14□□□□□ -0.17
Ndc1Q8VCB1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms