Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Gm24589-201ENSMUST00000116692 94 ntBASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Gm15173-201ENSMUST00000122049 433 ntBASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Gm6550-201ENSMUST00000187574 993 ntBASIC14.26□□□□□ -0.13
Lsm1Q8VC85 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm1Q8VC85 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Gm45167-201ENSMUST00000208007 322 ntBASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lsm1Q8VC85 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.24□□□□□ -0.13
Lsm1Q8VC85 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lsm1Q8VC85 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Gm7862-201ENSMUST00000121461 292 ntBASIC14.23□□□□□ -0.13
Lsm1Q8VC85 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms