Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Syne4Q8CII8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syne4Q8CII8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syne4Q8CII8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Syne4Q8CII8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syne4Q8CII8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syne4Q8CII8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.72■□□□□ 0.27
Syne4Q8CII8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syne4Q8CII8 Mir6392-201ENSMUST00000184924 108 ntBASIC16.72■□□□□ 0.27
Syne4Q8CII8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.72■□□□□ 0.27
Syne4Q8CII8 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.72■□□□□ 0.27
Syne4Q8CII8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syne4Q8CII8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syne4Q8CII8 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.72■□□□□ 0.27
Syne4Q8CII8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Syne4Q8CII8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syne4Q8CII8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syne4Q8CII8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syne4Q8CII8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syne4Q8CII8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.71■□□□□ 0.27
Syne4Q8CII8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.71■□□□□ 0.27
Syne4Q8CII8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.71■□□□□ 0.27
Syne4Q8CII8 Gm2451-201ENSMUST00000199447 999 ntBASIC16.71■□□□□ 0.27
Syne4Q8CII8 Gm10290-201ENSMUST00000200451 999 ntBASIC16.71■□□□□ 0.27
Syne4Q8CII8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.71■□□□□ 0.27
Syne4Q8CII8 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.71■□□□□ 0.27
Syne4Q8CII8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
Syne4Q8CII8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.71■□□□□ 0.27
Syne4Q8CII8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Syne4Q8CII8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Syne4Q8CII8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Syne4Q8CII8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.7■□□□□ 0.26
Syne4Q8CII8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Gm6266-201ENSMUST00000203844 806 ntBASIC16.7■□□□□ 0.26
Syne4Q8CII8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.7■□□□□ 0.26
Syne4Q8CII8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne4Q8CII8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Syne4Q8CII8 App-207ENSMUST00000227737 2827 ntBASIC16.69■□□□□ 0.26
Syne4Q8CII8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms