Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Smc5Q8CG46 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smc5Q8CG46 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.38■□□□□ 0.53
Smc5Q8CG46 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Gm8749-201ENSMUST00000117737 331 ntBASIC18.38■□□□□ 0.53
Smc5Q8CG46 Gm28033-201ENSMUST00000184224 96 ntBASIC18.38■□□□□ 0.53
Smc5Q8CG46 Gm34391-201ENSMUST00000203706 907 ntBASIC18.38■□□□□ 0.53
Smc5Q8CG46 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc5Q8CG46 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smc5Q8CG46 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.37■□□□□ 0.53
Smc5Q8CG46 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Smc5Q8CG46 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc5Q8CG46 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc5Q8CG46 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc5Q8CG46 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smc5Q8CG46 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smc5Q8CG46 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.36■□□□□ 0.53
Smc5Q8CG46 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc5Q8CG46 Gm18246-201ENSMUST00000221023 728 ntBASIC18.36■□□□□ 0.53
Smc5Q8CG46 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc5Q8CG46 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc5Q8CG46 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc5Q8CG46 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.35■□□□□ 0.53
Smc5Q8CG46 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.35■□□□□ 0.53
Smc5Q8CG46 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc5Q8CG46 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Gm7222-201ENSMUST00000117512 906 ntBASIC18.35■□□□□ 0.53
Smc5Q8CG46 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.35■□□□□ 0.53
Smc5Q8CG46 Gm45167-201ENSMUST00000208007 322 ntBASIC18.35■□□□□ 0.53
Smc5Q8CG46 Birc2-201ENSMUST00000054878 378 ntBASIC18.35■□□□□ 0.53
Smc5Q8CG46 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.35■□□□□ 0.53
Smc5Q8CG46 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.35■□□□□ 0.53
Smc5Q8CG46 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.35■□□□□ 0.53
Smc5Q8CG46 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smc5Q8CG46 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.34■□□□□ 0.53
Smc5Q8CG46 Gm4899-201ENSMUST00000178708 719 ntBASIC18.34■□□□□ 0.53
Smc5Q8CG46 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms