Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Carlr-201ENSMUST00000181515 2574 ntBASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Gm14140-201ENSMUST00000119999 995 ntBASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Gm5364-201ENSMUST00000216789 889 ntBASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Psmb5-202ENSMUST00000227257 622 ntBASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf3Q8C120 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf3Q8C120 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf3Q8C120 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sh3rf3Q8C120 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sh3rf3Q8C120 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms