Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf18Q8BM39 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf18Q8BM39 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm8825-201ENSMUST00000182565 998 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm4518-201ENSMUST00000182638 718 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf18Q8BM39 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.15
Prpf18Q8BM39 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf18Q8BM39 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms