Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Gm14859-201ENSMUST00000117752 357 ntBASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Gm4535-201ENSMUST00000182274 558 ntBASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Gm17807-201ENSMUST00000186869 298 ntBASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Gm10355-201ENSMUST00000097146 517 ntBASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdhr3Q8BL00 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Gm18489-201ENSMUST00000172565 551 ntBASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdhr3Q8BL00 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.96□□□□□ -0.33
Cdhr3Q8BL00 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms