Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2bQ8BJF9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2bQ8BJF9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2bQ8BJF9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Gm4535-201ENSMUST00000182274 558 ntBASIC15.21■□□□□ 0.03
Chmp2bQ8BJF9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms