Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.22□□□□□ -0.13
SynbQ8BI41 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.22□□□□□ -0.13
SynbQ8BI41 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.22□□□□□ -0.13
SynbQ8BI41 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.22□□□□□ -0.13
SynbQ8BI41 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SynbQ8BI41 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SynbQ8BI41 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Gm11745-201ENSMUST00000121669 448 ntBASIC14.21□□□□□ -0.13
SynbQ8BI41 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Rprl2-201ENSMUST00000157150 290 ntBASIC14.21□□□□□ -0.13
SynbQ8BI41 Mir6990-201ENSMUST00000183724 91 ntBASIC14.21□□□□□ -0.13
SynbQ8BI41 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SynbQ8BI41 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SynbQ8BI41 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SynbQ8BI41 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SynbQ8BI41 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.21□□□□□ -0.14
SynbQ8BI41 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
SynbQ8BI41 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SynbQ8BI41 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SynbQ8BI41 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SynbQ8BI41 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.2□□□□□ -0.14
SynbQ8BI41 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SynbQ8BI41 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SynbQ8BI41 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SynbQ8BI41 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SynbQ8BI41 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.2□□□□□ -0.14
SynbQ8BI41 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.2□□□□□ -0.14
SynbQ8BI41 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SynbQ8BI41 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SynbQ8BI41 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynbQ8BI41 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SynbQ8BI41 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SynbQ8BI41 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynbQ8BI41 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SynbQ8BI41 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.19□□□□□ -0.14
SynbQ8BI41 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.19□□□□□ -0.14
SynbQ8BI41 Gm27321-201ENSMUST00000185021 205 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms