Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf38Q8BI21 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Gm12008-201ENSMUST00000117791 755 ntBASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Gm13418-201ENSMUST00000119097 944 ntBASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Gm5682-201ENSMUST00000173402 505 ntBASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.35□□□□□ -0.11
Rnf38Q8BI21 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf38Q8BI21 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf38Q8BI21 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf38Q8BI21 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf38Q8BI21 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf38Q8BI21 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf38Q8BI21 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf38Q8BI21 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.33□□□□□ -0.12
Rnf38Q8BI21 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf38Q8BI21 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf38Q8BI21 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms