Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Upk3bQ80YF6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Carlr-201ENSMUST00000181515 2574 ntBASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Gm6659-201ENSMUST00000174752 547 ntBASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Upk3bQ80YF6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk3bQ80YF6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms