Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sh3tc2Q80VA5 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Gm2810-201ENSMUST00000118681 990 ntBASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Gm13453-201ENSMUST00000118708 357 ntBASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Gm9824-201ENSMUST00000178707 561 ntBASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc2Q80VA5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Gm11543-201ENSMUST00000120758 370 ntBASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc2Q80VA5 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.16■□□□□ 0.18
Sh3tc2Q80VA5 Gm14127-201ENSMUST00000117906 678 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms