Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Gm23935-201ENSMUST00000102303 57 ntBASIC15.6■□□□□ 0.09
Scube3Q66PY1 Gm24270-201ENSMUST00000102326 57 ntBASIC15.6■□□□□ 0.09
Scube3Q66PY1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Gm24245-201ENSMUST00000157318 57 ntBASIC15.6■□□□□ 0.09
Scube3Q66PY1 Gm27494-201ENSMUST00000184735 189 ntBASIC15.6■□□□□ 0.09
Scube3Q66PY1 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.6■□□□□ 0.09
Scube3Q66PY1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.6■□□□□ 0.09
Scube3Q66PY1 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.6■□□□□ 0.09
Scube3Q66PY1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Efs-202ENSMUST00000227037 2540 ntBASIC15.6■□□□□ 0.09
Scube3Q66PY1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Scube3Q66PY1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Gm13365-201ENSMUST00000121188 973 ntBASIC15.59■□□□□ 0.09
Scube3Q66PY1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Gm10576-201ENSMUST00000191927 825 ntBASIC15.59■□□□□ 0.09
Scube3Q66PY1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 CT009764.1-201ENSMUST00000222260 483 ntBASIC15.59■□□□□ 0.09
Scube3Q66PY1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.59■□□□□ 0.09
Scube3Q66PY1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scube3Q66PY1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scube3Q66PY1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scube3Q66PY1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scube3Q66PY1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.58■□□□□ 0.08
Scube3Q66PY1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.58■□□□□ 0.08
Scube3Q66PY1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.58■□□□□ 0.08
Scube3Q66PY1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Gm15483-201ENSMUST00000120338 456 ntBASIC15.58■□□□□ 0.08
Scube3Q66PY1 Gm11745-201ENSMUST00000121669 448 ntBASIC15.58■□□□□ 0.08
Scube3Q66PY1 Mir1895-201ENSMUST00000122615 79 ntBASIC15.58■□□□□ 0.08
Scube3Q66PY1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.58■□□□□ 0.08
Scube3Q66PY1 Chchd1-203ENSMUST00000224633 557 ntBASIC15.58■□□□□ 0.08
Scube3Q66PY1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.58■□□□□ 0.08
Scube3Q66PY1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scube3Q66PY1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 232.5 ms