Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.29□□□□□ -0.12
Sdc3Q64519 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc3Q64519 Gm16198-201ENSMUST00000118766 670 ntBASIC14.29□□□□□ -0.12
Sdc3Q64519 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.29□□□□□ -0.12
Sdc3Q64519 Gm27301-201ENSMUST00000184012 127 ntBASIC14.29□□□□□ -0.12
Sdc3Q64519 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sdc3Q64519 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.29□□□□□ -0.12
Sdc3Q64519 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc3Q64519 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.29□□□□□ -0.12
Sdc3Q64519 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc3Q64519 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sdc3Q64519 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc3Q64519 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc3Q64519 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sdc3Q64519 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sdc3Q64519 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc3Q64519 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc3Q64519 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc3Q64519 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc3Q64519 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sdc3Q64519 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Sdc3Q64519 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Gm15427-201ENSMUST00000117288 531 ntBASIC14.28□□□□□ -0.12
Sdc3Q64519 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.28□□□□□ -0.12
Sdc3Q64519 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.28□□□□□ -0.12
Sdc3Q64519 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.28□□□□□ -0.12
Sdc3Q64519 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sdc3Q64519 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.28□□□□□ -0.12
Sdc3Q64519 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Chchd1-203ENSMUST00000224633 557 ntBASIC14.28□□□□□ -0.12
Sdc3Q64519 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sdc3Q64519 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.28□□□□□ -0.12
Sdc3Q64519 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sdc3Q64519 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sdc3Q64519 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sdc3Q64519 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc3Q64519 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc3Q64519 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc3Q64519 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sdc3Q64519 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc3Q64519 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc3Q64519 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc3Q64519 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc3Q64519 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc3Q64519 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc3Q64519 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sdc3Q64519 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc3Q64519 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.27□□□□□ -0.13
Sdc3Q64519 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc3Q64519 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc3Q64519 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc3Q64519 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc3Q64519 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.27□□□□□ -0.13
Sdc3Q64519 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.27□□□□□ -0.13
Sdc3Q64519 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sdc3Q64519 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc3Q64519 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc3Q64519 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc3Q64519 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc3Q64519 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc3Q64519 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc3Q64519 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sdc3Q64519 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc3Q64519 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
Sdc3Q64519 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc3Q64519 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc3Q64519 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc3Q64519 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc3Q64519 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc3Q64519 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc3Q64519 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc3Q64519 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc3Q64519 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc3Q64519 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.26□□□□□ -0.13
Sdc3Q64519 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc3Q64519 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc3Q64519 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.26□□□□□ -0.13
Sdc3Q64519 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.26□□□□□ -0.13
Sdc3Q64519 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.26□□□□□ -0.13
Sdc3Q64519 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sdc3Q64519 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc3Q64519 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.26□□□□□ -0.13
Sdc3Q64519 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms