Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
VcanQ62059 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VcanQ62059 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.74□□□□□ -0.21
VcanQ62059 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VcanQ62059 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.73□□□□□ -0.21
VcanQ62059 Gm37986-201ENSMUST00000193285 383 ntBASIC13.73□□□□□ -0.21
VcanQ62059 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.73□□□□□ -0.21
VcanQ62059 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.73□□□□□ -0.21
VcanQ62059 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
VcanQ62059 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.73□□□□□ -0.21
VcanQ62059 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
VcanQ62059 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.73□□□□□ -0.21
VcanQ62059 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.73□□□□□ -0.21
VcanQ62059 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.73□□□□□ -0.21
VcanQ62059 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
VcanQ62059 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
VcanQ62059 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcanQ62059 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
VcanQ62059 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.72□□□□□ -0.21
VcanQ62059 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.72□□□□□ -0.21
VcanQ62059 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.72□□□□□ -0.21
VcanQ62059 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.72□□□□□ -0.21
VcanQ62059 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
VcanQ62059 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
VcanQ62059 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Gm43822-201ENSMUST00000200285 476 ntBASIC13.72□□□□□ -0.21
VcanQ62059 Gm45453-201ENSMUST00000211758 853 ntBASIC13.72□□□□□ -0.21
VcanQ62059 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
VcanQ62059 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.72□□□□□ -0.21
VcanQ62059 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.72□□□□□ -0.21
VcanQ62059 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcanQ62059 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VcanQ62059 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.71□□□□□ -0.21
VcanQ62059 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VcanQ62059 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcanQ62059 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VcanQ62059 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcanQ62059 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcanQ62059 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
VcanQ62059 Gm27341-201ENSMUST00000183570 106 ntBASIC13.71□□□□□ -0.21
VcanQ62059 Mir7654-201ENSMUST00000185082 70 ntBASIC13.71□□□□□ -0.21
VcanQ62059 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcanQ62059 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcanQ62059 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcanQ62059 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcanQ62059 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
VcanQ62059 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
VcanQ62059 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
VcanQ62059 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VcanQ62059 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcanQ62059 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.71□□□□□ -0.22
VcanQ62059 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
VcanQ62059 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcanQ62059 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcanQ62059 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcanQ62059 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcanQ62059 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcanQ62059 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.22
VcanQ62059 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcanQ62059 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcanQ62059 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcanQ62059 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VcanQ62059 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcanQ62059 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcanQ62059 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
VcanQ62059 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.7□□□□□ -0.22
VcanQ62059 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VcanQ62059 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VcanQ62059 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VcanQ62059 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms