Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.55□□□□□ -0.4
Scarb1Q61009 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scarb1Q61009 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scarb1Q61009 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scarb1Q61009 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scarb1Q61009 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scarb1Q61009 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scarb1Q61009 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scarb1Q61009 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scarb1Q61009 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scarb1Q61009 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scarb1Q61009 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scarb1Q61009 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scarb1Q61009 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scarb1Q61009 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scarb1Q61009 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.54□□□□□ -0.4
Scarb1Q61009 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.54□□□□□ -0.4
Scarb1Q61009 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Gm11950-201ENSMUST00000121615 838 ntBASIC12.54□□□□□ -0.4
Scarb1Q61009 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.54□□□□□ -0.4
Scarb1Q61009 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.54□□□□□ -0.4
Scarb1Q61009 Gm6345-202ENSMUST00000180900 204 ntBASIC12.54□□□□□ -0.4
Scarb1Q61009 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.54□□□□□ -0.4
Scarb1Q61009 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.54□□□□□ -0.4
Scarb1Q61009 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Scarb1Q61009 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Scarb1Q61009 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Scarb1Q61009 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Scarb1Q61009 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.54□□□□□ -0.4
Scarb1Q61009 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scarb1Q61009 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.54□□□□□ -0.4
Scarb1Q61009 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Scarb1Q61009 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Scarb1Q61009 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Scarb1Q61009 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.53□□□□□ -0.4
Scarb1Q61009 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Scarb1Q61009 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.53□□□□□ -0.4
Scarb1Q61009 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.53□□□□□ -0.4
Scarb1Q61009 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.53□□□□□ -0.4
Scarb1Q61009 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.53□□□□□ -0.4
Scarb1Q61009 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Scarb1Q61009 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.53□□□□□ -0.4
Scarb1Q61009 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.53□□□□□ -0.4
Scarb1Q61009 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Scarb1Q61009 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Scarb1Q61009 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scarb1Q61009 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scarb1Q61009 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scarb1Q61009 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scarb1Q61009 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Scarb1Q61009 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scarb1Q61009 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scarb1Q61009 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scarb1Q61009 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scarb1Q61009 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scarb1Q61009 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms