Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Prdm1Q60636 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Prdm1Q60636 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.35■□□□□ 0.37
Prdm1Q60636 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm1Q60636 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm1Q60636 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm1Q60636 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Prdm1Q60636 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm1Q60636 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.35■□□□□ 0.37
Prdm1Q60636 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm1Q60636 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm1Q60636 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Prdm1Q60636 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Prdm1Q60636 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Prdm1Q60636 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Prdm1Q60636 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm1Q60636 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm1Q60636 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.35■□□□□ 0.37
Prdm1Q60636 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm1Q60636 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Prdm1Q60636 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.34■□□□□ 0.37
Prdm1Q60636 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.34■□□□□ 0.37
Prdm1Q60636 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Prdm1Q60636 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm1Q60636 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.34■□□□□ 0.37
Prdm1Q60636 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.34■□□□□ 0.37
Prdm1Q60636 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.34■□□□□ 0.37
Prdm1Q60636 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.34■□□□□ 0.37
Prdm1Q60636 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm1Q60636 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm1Q60636 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm1Q60636 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm1Q60636 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Prdm1Q60636 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm1Q60636 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm1Q60636 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm1Q60636 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm1Q60636 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm1Q60636 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm1Q60636 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Prdm1Q60636 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prdm1Q60636 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.33■□□□□ 0.37
Prdm1Q60636 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prdm1Q60636 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.33■□□□□ 0.37
Prdm1Q60636 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prdm1Q60636 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Prdm1Q60636 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.33■□□□□ 0.37
Prdm1Q60636 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prdm1Q60636 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prdm1Q60636 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm1Q60636 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm1Q60636 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Prdm1Q60636 Carlr-201ENSMUST00000181515 2574 ntBASIC17.33■□□□□ 0.36
Prdm1Q60636 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm1Q60636 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.33■□□□□ 0.36
Prdm1Q60636 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.33■□□□□ 0.36
Prdm1Q60636 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm1Q60636 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.33■□□□□ 0.36
Prdm1Q60636 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm1Q60636 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm1Q60636 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Prdm1Q60636 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm1Q60636 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm1Q60636 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm1Q60636 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm1Q60636 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Prdm1Q60636 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Prdm1Q60636 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm1Q60636 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm1Q60636 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Prdm1Q60636 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.32■□□□□ 0.36
Prdm1Q60636 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Prdm1Q60636 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Prdm1Q60636 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 Gm43575-201ENSMUST00000196420 516 ntBASIC17.32■□□□□ 0.36
Prdm1Q60636 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.32■□□□□ 0.36
Prdm1Q60636 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.32■□□□□ 0.36
Prdm1Q60636 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.32■□□□□ 0.36
Prdm1Q60636 Gm45612-201ENSMUST00000211320 160 ntBASIC17.32■□□□□ 0.36
Prdm1Q60636 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.32■□□□□ 0.36
Prdm1Q60636 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.32■□□□□ 0.36
Prdm1Q60636 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Prdm1Q60636 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.32■□□□□ 0.36
Prdm1Q60636 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.32■□□□□ 0.36
Prdm1Q60636 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Prdm1Q60636 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm1Q60636 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms