Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shroom1Q5SX79 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shroom1Q5SX79 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Gm2810-201ENSMUST00000118681 990 ntBASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Gm15693-201ENSMUST00000120470 637 ntBASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Gm20949-201ENSMUST00000206478 952 ntBASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shroom1Q5SX79 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shroom1Q5SX79 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Shroom1Q5SX79 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Shroom1Q5SX79 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom1Q5SX79 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Shroom1Q5SX79 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom1Q5SX79 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom1Q5SX79 Gm11543-201ENSMUST00000120758 370 ntBASIC15.77■□□□□ 0.12
Shroom1Q5SX79 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.77■□□□□ 0.12
Shroom1Q5SX79 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom1Q5SX79 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms